<ici-import>
	<journal issn="1409-7621"/>
	<issue number="1" volume="40" year="2017" publicationDate="2017-03-15T09:00:00" coverDate="March 2017" coverUrl="https://macvetrev.mk/Files/Issues/Vol%2040/1/2017cover-40-1.png" numberOfArticles="14">
	<article externalId="2017-0010">
			<type>ORIGINAL_ARTICLE</type>
			<languageVersion language="en">
				<title>Development of simple multiplex real-time PCR assays for foodborne pathogens detection and identification on LightCycler</title>
				<abstract>Most acute intestinal diseases are caused by food-borne pathogens. A fast and simple real-time PCR-based procedure for simultaneous detection of food contamination by any of the five food-borne pathogens: Campylobacter jejuni, Mycobacterium bovis, Enterobacter sakazaki, Shigella boydii, Clostridium perfrigens using multiplex EvaGreen real-time PCR for LightCycler was developed and evaluated. Real-time qPCR showed excellent sensitivity. Tm calling and Melting Curve Genotyping (MCG) were used for analysis of PCR product melting curves. The Melting Curve Genotyping option showed good performance for discrimination of positive samples containing DNA of single pathogen or pathogen mixtures from negative samples.</abstract>
				<pdfFileUrl>https://macvetrev.mk/Files/Article/2019/10.1515/macvetrev-2017-0010/macvetrev-2017-0010.pdf</pdfFileUrl>
				<publicationDate>2017-03-15T09:00:00</publicationDate>
				<pageFrom>53</pageFrom>
				<pageTo>58</pageTo>
				<doi>10.2478/macvetrev-2017-0010</doi>
				<keywords>
					<keyword>food-borne pathogens</keyword>
					<keyword>multiplex real-time PCR</keyword>
					<keyword>melting curve genotyping</keyword>
				</keywords>
			</languageVersion>
			<authors>
				<author>
					<name>Avo</name>
					<name2></name2>
					<surname>Karus</surname>
					<email>avo.karus@emu.ee </email>
					<polishAffiliation>false</polishAffiliation>
					<order>1</order>
					<instituteAffiliation>Department of Food Sciences and Food Technology, Institute of Veterinary Medicine and Animal Science, Estonian University of Life Sciences,  Kreutzwaldi 62, Tartu, Estonia</instituteAffiliation>
					<role>LEAD_AUTHOR</role>
				</author>
				<author>
					<name>Fabrizio</name>
					<name2></name2>
					<surname>Ceciliani</surname>
					<email></email>
					<polishAffiliation>false</polishAffiliation>
					<order>2</order>
					<instituteAffiliation>Department of Veterinary Science and Public Health, University of Milan,  via Celoria 10, 20133 Milan, Italy</instituteAffiliation>
					<role>AUTHOR</role>
				</author>
				<author>
					<name>Armand</name>
					<name2>Sanches</name2>
					<surname>Bonastre</surname>
					<email></email>
					<polishAffiliation>false</polishAffiliation>
					<order>3</order>
					<instituteAffiliation>Universitat Autonoma de Barcelona, Campus de la UAB, Bellaterra, Spain</instituteAffiliation>
					<role>AUTHOR</role>
				</author>
				<author>
					<name>Virge</name>
					<name2></name2>
					<surname>Karus</surname>
					<email></email>
					<polishAffiliation>false</polishAffiliation>
					<order>4</order>
					<instituteAffiliation>Department of Food Sciences and Food Technology, Institute of Veterinary Medicine and Animal Science, Estonian University of Life Sciences,  Kreutzwaldi 62, Tartu, Estonia</instituteAffiliation>
					<role>AUTHOR</role>
				</author>
			</authors>
			<references>
				<reference>
					<unparsedContent>Fleckenstein JM, Bartels SR, Drevets PD, Bronze MS, Drevets DA, Infectious agents of food- and water-borne illnessesAm J Med Sci 2010; 340: 3238-246.</unparsedContent>
					<order>1</order>
					<doi>10.1097/MAJ.0b013e3181e99893</doi>
				</reference>
				<reference>
					<unparsedContent>Postollec F, Falentin H, Pavan S, Combrisson J, Sohier D, Recent advances in quantitative PCR (qPCR) applications in food microbiologyFood Microbiol 2011; 28: 5848-861. PMid:21569926</unparsedContent>
					<order>2</order>
					<doi>10.1016/j.fm.2011.02.008</doi>
				</reference>
				<reference>
					<unparsedContent>Severgnini M, Cremonesi P, Consolandi C, De Bellis G, Castiglioni B, Advances in DNA Microarray technology for the detection of foodborne pathogensFood Bioproc Tech 2011; 4: 936-953.</unparsedContent>
					<order>3</order>
					<doi>10.1007/s11947-010-0430-5</doi>
				</reference>
				<reference>
					<unparsedContent>Jošić D, Petković J, Bunčić O, Lepšanović Z, Pivić R, Rašić Z, Katić V, Typing of indigenous Campylobacter spp. from Serbia by M-PCR and RAPDActa Veterinaria-Beograd 2016; 66: 2203-213.</unparsedContent>
					<order>4</order>
					<doi>10.1515/acve-2016-0017</doi>
				</reference>
				<reference>
					<unparsedContent>Fukushima H, Katsube K, Hata Y, Kishi R, Fujiwara S, Rapid separation and concentration of food-borne pathogens in food samples prior to quantification by viable-cell counting and real-time PCRAppl Environ Microbiol 2007; 73: 192-100. PMid:17056684PMCid: PMC1797114</unparsedContent>
					<order>5</order>
					<doi>10.1128/AEM.01772-06</doi>
				</reference>
				<reference>
					<unparsedContent>Fukushima H, Kawase J, Etoh Y, Sugama K, Yashiro S, Iida N, Yamaguchi K, Simultaneous screening of 24 target genes of foodborne pathogens in 35 foodborne outbreaks using multiplex real-time SYBR green PCR analysisInternational Journal of Microbiology 12010, Article ID 864817 2010; 18-</unparsedContent>
					<order>6</order>
					<doi>10.1155/2010/864817</doi>
				</reference>
				<reference>
					<unparsedContent>Zhao X, Lin C-W, Wang J, Oh DH, Advances in rapid detection methods for foodborne pathogensJ. Microbiol. Biotechnol 2014; 24: 3297-312. PMid:24375418</unparsedContent>
					<order>7</order>
					<doi>10.4014/jmb.1310.10013</doi>
				</reference>
				<reference>
					<unparsedContent>Binnicker MJ, Multiplex molecular panels for diagnosis of gastrointestinal infection: performance, result interpretation, and cost-effectivenessJ. Clin. Microbiol 2015; 53: 3723-3728.</unparsedContent>
					<order>8</order>
					<doi>10.1128/JCM.02103-15</doi>
				</reference>
				<reference>
					<unparsedContent>Cremonesi P, Pisani LF, Lecchi C, Ceciliani F, Martino P, Bonastre AS, Karus A, Balzaretti C, Castiglioni B, Development of 23 individual TaqMan®real-time PCR assays for identifying common foodborne pathogens using a single set of amplification conditionsFood Microbiol 2014; 43: 35-40. PMid:24929880</unparsedContent>
					<order>9</order>
					<doi>10.1016/j.fm.2014.04.007</doi>
				</reference>
				<reference>
					<unparsedContent>Amagliani G, Omiccioli E, Campo A, Bruce IJ, Brandi G, Magnani M, Development of a magnetic capture hybridization-PCR assay for Listeria monocytogenes direct detection in milk samplesJ Appl Microbiol 2006; 100: 2375-383. PMid:16430514</unparsedContent>
					<order>10</order>
					<doi>10.1111/j.1365-2672.2005.02761.x</doi>
				</reference>
				<reference>
					<unparsedContent>Justé A, Thomma BP, Lievens B, Recent advances in molecular techniques to study microbial communities in food-associated matrices and processesFood Microbiol 2008; 25: 6745-761. PMid:18620966</unparsedContent>
					<order>11</order>
					<doi>10.1016/j.fm.2008.04.009</doi>
				</reference>
				<reference>
					<unparsedContent>Elizaquível P, Aznar R, A multiplex RTi-PCR reaction for simultaneous detection of Escherichia coli O157: H7, Salmonella spp. and Staphylococcus aureus on fresh, minimally processed vegetablesFood Microbiol 2008; 25: 5705-713. PMid:18541170</unparsedContent>
					<order>12</order>
					<doi>10.1016/j.fm.2008.03.002</doi>
				</reference>
				<reference>
					<unparsedContent>Kawasaki S, Fratamico PM, Horikoshi N, Okada Y, Takeshita K, Sameshima T, Kawamoto S, Multiplex real-time polymerase chain reaction assay for simultaneous detection and quantification of Salmonella species, Listeria monocytogenes, and Escherichia coli O157: H7 in ground pork samplesFoodborne Pathog Dis 2010; 7: 5549-554. PMid:20132032</unparsedContent>
					<order>13</order>
					<doi>10.1089/fpd.2009.0465</doi>
				</reference>
				<reference>
					<unparsedContent>Omiccioli E, Amagliani G, Brandi G, Magnani M, A new platform for Real-Time PCR detection of Salmonella spp, Listeria monocytogenes and Escherichia coli O157 in milkFood Microbiol 2009; 26: 6615-622. PMid:19527837</unparsedContent>
					<order>14</order>
					<doi>10.1016/j.fm.2009.04.008</doi>
				</reference>
				<reference>
					<unparsedContent>Suo B, He Y, Tu SI, Shi X, A multiplex real-time polymerase chain reaction for simultaneous detection of Salmonella spp, Escherichia coli O157, and Listeria monocytogenes in meat productsFoodborne Pathog Dis 2010; 7: 6619-628. PMid:20113204</unparsedContent>
					<order>15</order>
					<doi>10.1089/fpd.2009.0430</doi>
				</reference>
			</references>
		</article>
		</issue>
</ici-import>